Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetoacetate decarboxylase family proteinHALXA_RS06870Not AvailablePositive1398485 - 139927027710.4
pyridoxal 5'-phosphate synthase lyase subunit pdxsHALXA_RS06875Not AvailablePositive1399349 - 140029633438.4
rubrerythrin-like domain-containing proteinHALXA_RS21645Not AvailablePositive1400535 - 14006784892.66
glutamate dehydrogenase gdhbHALXA_RS06880Not AvailablePositive1400703 - 140201947589.3
hypothetical proteinHALXA_RS06885Not AvailableNegative1402040 - 140239312051.0
homoserine kinaseHALXA_RS06890Not AvailableNegative1402490 - 140337129821.8
mfs transporterHALXA_RS06895Not AvailableNegative1403433 - 140469843854.8
duf6149 family proteinHALXA_RS06900Not AvailableNegative1404827 - 140544122720.7
nad(p)/fad-dependent oxidoreductaseHALXA_RS06905Not AvailablePositive1405749 - 140698745684.7
nrfd/psrc family molybdoenzyme membrane anchor subunitHALXA_RS06910Not AvailablePositive1407233 - 140857349554.0

Displaying genes 1521 – 1530 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.