Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenase family proteinHALXA_RS06820Not AvailableNegative1384491 - 138597853932.8
hypothetical proteinHALXA_RS06825Not AvailableNegative1386127 - 138745544614.8
bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3- deoxygalactonokinaseHALXA_RS06830Not AvailableNegative1387577 - 138853034451.3
rna 3'-terminal phosphate cyclaseHALXA_RS06835Not AvailableNegative1388654 - 138981440576.3
duf6293 family proteinHALXA_RS06840Not AvailablePositive1389912 - 139084435277.7
valine--trna ligaseHALXA_RS06845Not AvailablePositive1391156 - 1393828102365.0
halod1 output domain-containing proteinHALXA_RS06850Not AvailableNegative1394043 - 139431510197.0
ribonuclease hi family proteinHALXA_RS06855Not AvailablePositive1394633 - 139528622511.0
atp-binding proteinHALXA_RS06860Not AvailableNegative1395362 - 139751880968.0
duf1405 domain-containing proteinHALXA_RS06865Not AvailableNegative1397649 - 139835926007.8

Displaying genes 1511 – 1520 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.