Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dolichyl-phosphate hexose transferaseHALXA_RS06770Not AvailableNegative1375480 - 137612723860.2
gmc family oxidoreductaseHALXA_RS06775Not AvailableNegative1376287 - 137791859271.0
sos response-associated peptidaseHALXA_RS06780Not AvailableNegative1378071 - 137879327008.7
rna-binding proteinHALXA_RS06785Not AvailableNegative1378866 - 137934517321.9
hypothetical proteinHALXA_RS06790Not AvailablePositive1379668 - 137998812720.7
abc transporter permease subunitHALXA_RS06795Not AvailableNegative1380002 - 138079928324.9
atp-binding cassette domain-containing proteinHALXA_RS06800Not AvailableNegative1380796 - 138170431733.6
rnb domain-containing ribonucleaseHALXA_RS06805Not AvailablePositive1381809 - 138310749839.7
gnat family n-acetyltransferaseHALXA_RS06810Not AvailableNegative1383139 - 138372021153.1
gnat family n-acetyltransferaseHALXA_RS06815Not AvailableNegative1383788 - 138431218750.5

Displaying genes 1501 – 1510 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.