Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thermosome subunit betaHALXA_RS06720Not AvailableNegative1362756 - 136441458744.9
nad-dependent epimerase/dehydratase family proteinHALXA_RS06725Not AvailablePositive1364808 - 136574933971.5
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinHALXA_RS06730Not AvailablePositive1365870 - 136705138861.8
hypothetical proteinHALXA_RS06735Not AvailablePositive1367075 - 136824744391.9
extracellular solute-binding proteinHALXA_RS06740Not AvailablePositive1368287 - 136945040984.1
abc transporter permeaseHALXA_RS06745Not AvailablePositive1369447 - 137105756764.2
glycosyltransferase family 39 proteinHALXA_RS06750Not AvailablePositive1371064 - 137315774222.8
gluconate 2-dehydrogenase subunit 3 family proteinHALXA_RS06755Not AvailablePositive1373160 - 137369318386.9
pentapeptide repeat-containing proteinHALXA_RS06760Not AvailablePositive1373814 - 137486038466.1
doxx family membrane proteinHALXA_RS06765Not AvailablePositive1374955 - 137542516457.8

Displaying genes 1491 – 1500 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.