Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinHALXA_RS06675Not AvailableNegative1353386 - 135530570414.5
sodium:calcium antiporterHALXA_RS06680Not AvailableNegative1355403 - 135656640317.6
hypothetical proteinHALXA_RS22010Not AvailableNegative1356722 - 13568655248.71
copg family ribbon-helix-helix proteinHALXA_RS06685Not AvailablePositive1357034 - 135742315151.7
copg family ribbon-helix-helix proteinHALXA_RS06690Not AvailableNegative1357428 - 135787116222.0
gtp-binding proteinHALXA_RS06695Not AvailablePositive1357970 - 135918744998.1
metal abc transporter substrate-binding proteinHALXA_RS06700Not AvailablePositive1359446 - 136055239746.1
hypothetical proteinHALXA_RS06705Not AvailablePositive1360549 - 13607918638.81
metal abc transporter atp-binding proteinHALXA_RS06710Not AvailablePositive1360788 - 136156427975.0
metal abc transporter permeaseHALXA_RS06715Not AvailablePositive1361620 - 136255232469.8

Displaying genes 1481 – 1490 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.