Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinHALXA_RS06625Not AvailableNegative1343761 - 134415915081.8
imidazole glycerol phosphate synthase subunit hishHALXA_RS06630Not AvailablePositive1344270 - 134493223535.1
cdc6/cdc18 family proteinHALXA_RS06635Not AvailablePositive1345844 - 134704344625.2
hypothetical proteinHALXA_RS06640Not AvailablePositive1347139 - 134754614099.3
hypothetical proteinHALXA_RS06645Not AvailableNegative1347634 - 134799013514.6
trna (guanine(26)-n(2))-dimethyltransferaseHALXA_RS06650Not AvailablePositive1348136 - 134925740849.4
hypothetical proteinHALXA_RS06655Not AvailableNegative1349308 - 13495117436.11
yihy/virulence factor brkb family proteinHALXA_RS06660Not AvailablePositive1349676 - 135112752005.3
type i glutamate--ammonia ligaseHALXA_RS06665Not AvailableNegative1351318 - 135267350526.1
hth-type transcriptional regulator lrpHALXA_RS06670Not AvailablePositive1352800 - 135326116874.4

Displaying genes 1471 – 1480 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.