Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS06525Not AvailablePositive1323957 - 13242089057.48
peptide chain release factor arf-1HALXA_RS06530Not AvailableNegative1324329 - 132559447367.0
mind/para family proteinHALXA_RS06535Not AvailablePositive1325764 - 132669031223.7
hypothetical proteinHALXA_RS06540Not AvailablePositive1327049 - 132760619936.0
arginine--trna ligaseHALXA_RS06545Not AvailableNegative1327698 - 132948566890.6
uridine kinaseHALXA_RS06550Not AvailableNegative1329599 - 133032427056.8
nudix domain-containing proteinHALXA_RS06555Not AvailableNegative1330466 - 133095417346.2
pyridoxal-phosphate dependent enzymeHALXA_RS06560Not AvailableNegative1331053 - 133222841711.4
succinylglutamate desuccinylase/aspartoacylase family proteinHALXA_RS06565Not AvailableNegative1332230 - 133318934425.2
hypothetical proteinHALXA_RS06570Not AvailableNegative1333301 - 133482556674.9

Displaying genes 1451 – 1460 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.