Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf402 domain-containing proteinHALXA_RS06475Not AvailablePositive1315989 - 131744352531.3
formate/nitrite transporter family proteinHALXA_RS06480Not AvailableNegative1317470 - 131849837734.3
nudix hydrolaseHALXA_RS06485Not AvailableNegative1318638 - 131909616968.6
bile acid:sodium symporter family proteinHALXA_RS06490Not AvailableNegative1319204 - 132019334205.3
hypothetical proteinHALXA_RS06495Not AvailablePositive1320360 - 132062910037.5
hypothetical proteinHALXA_RS06500Not AvailablePositive1320737 - 13209707804.7
acyltransferaseHALXA_RS06505Not AvailablePositive1321076 - 132197534432.8
hypothetical proteinHALXA_RS06510Not AvailablePositive1322052 - 132237212105.1
halod1 output domain-containing proteinHALXA_RS06515Not AvailablePositive1322518 - 132283511441.3
hypothetical proteinHALXA_RS06520Not AvailableNegative1322909 - 132367627513.9

Displaying genes 1441 – 1450 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.