Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
samp-activating enzyme e1HALXA_RS06435Not AvailableNegative1306155 - 130699429987.1
hvo_0416 family zinc finger proteinHALXA_RS20975Not AvailablePositive1307169 - 13073546563.28
hypothetical proteinHALXA_RS22005Not AvailablePositive1307537 - 13076955709.65
uvrd-helicase domain-containing proteinHALXA_RS06440Not AvailablePositive1307805 - 130970371430.3
m24 family metallopeptidaseHALXA_RS06445Not AvailablePositive1309707 - 131100244017.1
hypothetical proteinHALXA_RS06450Not AvailableNegative1311064 - 13113309111.15
riboflavin synthaseHALXA_RS06455Not AvailablePositive1311482 - 131208721964.5
hypothetical proteinHALXA_RS06460Not AvailableNegative1312093 - 131421074335.1
prsw family intramembrane metalloproteaseHALXA_RS06465Not AvailableNegative1314324 - 131533136356.3
hypothetical proteinHALXA_RS06470Not AvailablePositive1315526 - 131590914461.5

Displaying genes 1431 – 1440 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.