Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heavy metal translocating p-type atpaseHALXA_RS06250Not AvailableNegative1267666 - 127023390047.9
heme-copper oxidase subunit iiiHALXA_RS06255Not AvailableNegative1270348 - 127122931336.9
hypothetical proteinHALXA_RS06260Not AvailablePositive1271406 - 127185514696.8
duf6789 family proteinHALXA_RS06265Not AvailablePositive1272134 - 127267619227.4
hypothetical proteinHALXA_RS06270Not AvailableNegative1272901 - 127381233082.2
cbb3-type cytochrome c oxidase subunit iHALXA_RS06275Not AvailableNegative1273982 - 127578766190.8
duf6789 family proteinHALXA_RS06280Not AvailableNegative1275972 - 127638814847.5
cytochrome c oxidase subunit iiHALXA_RS06285Not AvailableNegative1276385 - 127717929196.1
duf6684 family proteinHALXA_RS06290Not AvailablePositive1277307 - 12775348284.22
hypothetical proteinHALXA_RS22650Not AvailablePositive1277625 - 12777504212.32

Displaying genes 1391 – 1400 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.