Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkaline phosphatase phoxHALXA_RS06060Not AvailableNegative1227216 - 122986797077.5
hypothetical proteinHALXA_RS06065Not AvailableNegative1230196 - 123060915331.5
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseHALXA_RS06070Not AvailableNegative1230784 - 123231355447.2
httm domain-containing proteinHALXA_RS06075Not AvailableNegative1232417 - 123409661278.6
thiol-disulfide oxidoreductase dcc family proteinHALXA_RS06080Not AvailablePositive1234272 - 123468815396.5
dna double-strand break repair nuclease nuraHALXA_RS06085Not AvailablePositive1234812 - 123610748780.6
bifunctional metallophosphatase/5'-nucleotidaseHALXA_RS06090Not AvailablePositive1236203 - 123845579740.3
cohesin domain-containing proteinHALXA_RS06095Not AvailablePositive1238476 - 123936930698.6
hypothetical proteinHALXA_RS06100Not AvailableNegative1239433 - 123977412668.6
hypothetical proteinHALXA_RS06105Not AvailablePositive1240115 - 124078624448.2

Displaying genes 1351 – 1360 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.