Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m48 family metalloproteaseHALXA_RS05965Not AvailablePositive1208334 - 120943439475.6
duf4129 domain-containing proteinHALXA_RS05970Not AvailablePositive1209431 - 121118859904.0
hypothetical proteinHALXA_RS05975Not AvailablePositive1211185 - 121197928133.9
duf58 domain-containing proteinHALXA_RS05980Not AvailablePositive1211976 - 121337349132.0
hypothetical proteinHALXA_RS21990Not AvailablePositive1213370 - 121480346103.7
aaa family atpaseHALXA_RS05990Not AvailableNegative1214789 - 121576635416.5
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofgHALXA_RS05995Not AvailableNegative1215841 - 121701642790.7
hypothetical proteinHALXA_RS21995Not AvailablePositive1217160 - 12173185781.84
2-phospho-l-lactate guanylyltransferaseHALXA_RS06000Not AvailableNegative1217343 - 121802323923.0
tubulin/ftsz family proteinHALXA_RS06005Not AvailableNegative1218281 - 121945942000.0

Displaying genes 1331 – 1340 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.