Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS05915Not AvailablePositive1198760 - 119915214609.8
anthranilate phosphoribosyltransferaseHALXA_RS05920Not AvailablePositive1199267 - 120033439377.4
hypothetical proteinHALXA_RS05925Not AvailableNegative1200390 - 120077312932.1
Trna-ileNot AvailableNot AvailablePositive1200965 - 1201038Not Available
fxsa family proteinHALXA_RS05935Not AvailableNegative1201107 - 120175722359.8
duf255 domain-containing proteinHALXA_RS05940Not AvailablePositive1201916 - 120359560591.8
trmb family transcriptional regulatorHALXA_RS05945Not AvailablePositive1203675 - 120447829838.7
gtp cyclohydrolase mptaHALXA_RS05950Not AvailableNegative1204487 - 120542234427.8
hypothetical proteinHALXA_RS05955Not AvailableNegative1205842 - 120661527945.4
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferaseHALXA_RS05960Not AvailableNegative1206900 - 120815346717.6

Displaying genes 1321 – 1330 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.