Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductaseHALXA_RS05865Not AvailableNegative1182735 - 118372735719.1
pas domain s-box proteinHALXA_RS05870Not AvailableNegative1183813 - 1188066158211.0
peptidylprolyl isomeraseHALXA_RS05875Not AvailableNegative1188192 - 118882422356.2
peptidylprolyl isomeraseHALXA_RS05880Not AvailableNegative1188964 - 118948218882.4
succinylglutamate desuccinylase/aspartoacylase family proteinHALXA_RS05885Not AvailablePositive1189629 - 119061836102.0
hypothetical proteinHALXA_RS20965Not AvailableNegative1190640 - 119105014185.1
archaea-specific smc-related proteinHALXA_RS05895Not AvailablePositive1191320 - 119330876586.2
shoct domain-containing proteinHALXA_RS05900Not AvailablePositive1193489 - 119391716014.1
acyl-coa dehydrogenase family proteinHALXA_RS05905Not AvailableNegative1193979 - 119515142848.3
fad-binding and (fe-s)-binding domain-containing proteinHALXA_RS05910Not AvailablePositive1195492 - 1198566111518.0

Displaying genes 1311 – 1320 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.