Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseHALXA_RS05765Not AvailablePositive1164764 - 116521616725.2
nramp family divalent metal transporterHALXA_RS05770Not AvailableNegative1165286 - 116666546930.9
cupin domain-containing proteinHALXA_RS05775Not AvailableNegative1166880 - 116722112304.8
duf5817 domain-containing proteinHALXA_RS05780Not AvailablePositive1167387 - 116791119351.2
hydroxymethylglutaryl-coa reductase (nadph)HALXA_RS05785Not AvailableNegative1167930 - 116918042714.4
hypothetical proteinHALXA_RS05790Not AvailableNegative1169270 - 116968914523.6
amidohydrolaseHALXA_RS05795Not AvailablePositive1169827 - 117141357714.1
helix-turn-helix domain-containing proteinHALXA_RS05800Not AvailablePositive1171475 - 117213423944.1
halod1 output domain-containing proteinHALXA_RS05805Not AvailablePositive1172241 - 117263913440.4
duf2267 domain-containing proteinHALXA_RS05810Not AvailablePositive1172744 - 117321117280.9

Displaying genes 1291 – 1300 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.