Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS00015Not AvailableNegative1980 - 234212124.4
hypothetical proteinHALXA_RS00020Not AvailableNegative2471 - 294116487.2
srpbcc family proteinHALXA_RS00025Not AvailablePositive3090 - 389929014.5
saccharopine dehydrogenase family proteinHALXA_RS00030Not AvailableNegative3959 - 511941227.2
hypothetical proteinHALXA_RS00035Not AvailableNegative5196 - 572320351.9
methyl-accepting chemotaxis proteinHALXA_RS00040Not AvailablePositive5872 - 850293741.4
duf192 domain-containing proteinHALXA_RS00045Not AvailablePositive8603 - 896513582.1
(r)-citramalate synthaseHALXA_RS00050Not AvailablePositive9182 - 1071454060.5
hypothetical proteinHALXA_RS00055Not AvailableNegative10885 - 110827037.86
4fe-4s ferredoxin n-terminal domain-containing proteinHALXA_RS00060Not AvailableNegative11170 - 1260352843.6

Displaying genes 121 – 130 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.