Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m28 family peptidaseHALXA_RS05715Not AvailablePositive1154570 - 115603653073.1
hypothetical proteinHALXA_RS05720Not AvailableNegative1156075 - 115688429732.2
dna polymerase beta superfamily proteinHALXA_RS05725Not AvailableNegative1157500 - 115842934845.5
glutaredoxin family proteinHALXA_RS05730Not AvailablePositive1158988 - 11592248974.39
hit family proteinHALXA_RS05735Not AvailableNegative1159255 - 115979420166.1
hypothetical proteinHALXA_RS05740Not AvailablePositive1160072 - 11602727618.63
type ii methionyl aminopeptidaseHALXA_RS05745Not AvailableNegative1160382 - 116129633253.1
isoaspartyl peptidase/l-asparaginaseHALXA_RS05750Not AvailableNegative1161651 - 116257131524.0
hypothetical proteinHALXA_RS05755Not AvailablePositive1162664 - 116296910676.2
isocitrate dehydrogenase (nadp(+))HALXA_RS05760Not AvailablePositive1163233 - 116451046956.8

Displaying genes 1281 – 1290 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.