Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorHALXA_RS05615Not AvailableNegative1135372 - 113669448054.4
hypothetical proteinHALXA_RS05620Not AvailablePositive1136885 - 113814145696.8
type iv pilin n-terminal domain-containing proteinHALXA_RS05625Not AvailablePositive1138253 - 113874417125.5
methyltransferase domain-containing proteinHALXA_RS05630Not AvailableNegative1138746 - 113936923396.7
atp synthase archaeal subunit hHALXA_RS05635Not AvailablePositive1139525 - 113985712969.6
v-type atp synthase subunit iHALXA_RS05640Not AvailablePositive1139862 - 114208480810.0
hypothetical proteinHALXA_RS05645Not AvailablePositive1142088 - 11423638986.0
v-type atp synthase subunit eHALXA_RS05650Not AvailablePositive1142388 - 114297522113.9
v-type atp synthase subunit cHALXA_RS05655Not AvailablePositive1142972 - 114402139860.4
v-type atp synthase subunit fHALXA_RS05660Not AvailablePositive1144018 - 114435011883.7

Displaying genes 1261 – 1270 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.