Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tfx family dna-binding proteinHALXA_RS05565Not AvailableNegative1124292 - 112475616497.4
tram domain-containing proteinHALXA_RS05570Not AvailableNegative1124967 - 112545217586.7
electron transfer flavoprotein subunit beta/fixa family proteinHALXA_RS05575Not AvailablePositive1125750 - 112654128515.0
electron transfer flavoprotein subunit alpha/fixb family proteinHALXA_RS05580Not AvailablePositive1126538 - 112749133333.7
methyl-accepting chemotaxis proteinHALXA_RS05585Not AvailablePositive1127723 - 113040494922.3
polyprenyl synthetase family proteinHALXA_RS05590Not AvailablePositive1130462 - 113130430169.3
duf373 family proteinHALXA_RS05595Not AvailableNegative1131338 - 113247440293.9
hypothetical proteinHALXA_RS05600Not AvailableNegative1132638 - 113324022287.4
radical sam proteinHALXA_RS05605Not AvailablePositive1133432 - 113442738261.3
hypothetical proteinHALXA_RS05610Not AvailablePositive1134816 - 113513911316.4

Displaying genes 1251 – 1260 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.