Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHALXA_RS05515Not AvailableNegative1116468 - 111681512913.4
creatininase family proteinHALXA_RS05520Not AvailablePositive1116953 - 111769626848.8
duf5790 family proteinHALXA_RS05525Not AvailableNegative1117794 - 111826416688.0
dihydroneopterin aldolase family proteinHALXA_RS05530Not AvailableNegative1118436 - 111880413153.2
nad-dependent glucose-6-phosphate dehydrogenase azfHALXA_RS05535Not AvailablePositive1118966 - 111970927447.4
duf309 domain-containing proteinHALXA_RS05540Not AvailableNegative1120022 - 112063622857.4
aminopeptidaseHALXA_RS05545Not AvailableNegative1120993 - 112209040178.9
queuosine precursor transporterHALXA_RS05550Not AvailableNegative1122175 - 112290025125.9
cold-shock proteinHALXA_RS05555Not AvailablePositive1123378 - 11235727043.95
padr family transcriptional regulatorHALXA_RS05560Not AvailablePositive1123834 - 112410910645.2

Displaying genes 1241 – 1250 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.