Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histone deacetylase family proteinHALXA_RS05415Not AvailablePositive1098440 - 109946836988.5
cca trna nucleotidyltransferaseHALXA_RS05420Not AvailableNegative1099497 - 110088852106.7
Trna-asnNot AvailableNot AvailablePositive1101035 - 1101140Not Available
group i intron-associated pd-(d/e)xk endonucleaseHALXA_RS05430Not AvailablePositive1101246 - 110171017764.7
molybdenum cofactor biosynthesis protein bHALXA_RS05435Not AvailablePositive1101801 - 110239121106.3
replication protein aHALXA_RS05440Not AvailablePositive1102529 - 110345834318.4
rpa family proteinHALXA_RS05445Not AvailablePositive1103460 - 110409523890.9
alpha/beta hydrolaseHALXA_RS05450Not AvailableNegative1104146 - 110485324647.6
voc family proteinHALXA_RS05455Not AvailableNegative1104856 - 110583036008.5
ribbon-helix-helix protein, copg familyHALXA_RS05460Not AvailablePositive1105967 - 110639216114.2

Displaying genes 1221 – 1230 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.