Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fluoride efflux transporter flucHALXA_RS05230Not AvailableNegative1061440 - 106188615362.3
cation diffusion facilitator family transporterHALXA_RS05235Not AvailablePositive1062156 - 106307632700.7
mbl fold metallo-hydrolaseHALXA_RS05240Not AvailablePositive1063150 - 106410634422.2
amp-dependent synthetase/ligaseHALXA_RS05245Not AvailablePositive1064232 - 106623274370.6
magnesium transporterHALXA_RS05250Not AvailableNegative1066388 - 106699020951.0
magnesium transporterHALXA_RS05255Not AvailableNegative1066993 - 106756519980.2
hypothetical proteinHALXA_RS05260Not AvailablePositive1067706 - 10679489193.79
duf2391 family proteinHALXA_RS05265Not AvailableNegative1067984 - 106856221107.6
abc transporter substrate-binding proteinHALXA_RS05270Not AvailableNegative1068805 - 107003745537.7
hypothetical proteinHALXA_RS05275Not AvailableNegative1070345 - 107070713630.7

Displaying genes 1181 – 1190 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.