Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kaic domain-containing proteinHALXA_RS05130Not AvailablePositive1039011 - 104020742718.2
hypothetical proteinHALXA_RS05135Not AvailablePositive1040341 - 10405839166.64
universal stress proteinHALXA_RS05140Not AvailablePositive1040794 - 104122815166.2
hypothetical proteinHALXA_RS05145Not AvailablePositive1041368 - 104279550973.0
dna-directed rna polymerase subunit hHALXA_RS05150Not AvailablePositive1043063 - 10432908630.07
dna-directed rna polymerase subunit b''HALXA_RS05155Not AvailablePositive1043291 - 104487159415.0
dna-directed rna polymerase subunit bHALXA_RS05160Not AvailablePositive1044875 - 104670467977.1
dna-directed rna polymerase subunit a'HALXA_RS05165Not AvailablePositive1046716 - 1049643109491.0
dna-directed rna polymerase subunit a''HALXA_RS05170Not AvailablePositive1049636 - 105085944810.4
nusa-like transcription termination signal-binding factorHALXA_RS05175Not AvailablePositive1050863 - 105134216811.3

Displaying genes 1161 – 1170 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.