Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hvo_0649 family zinc finger proteinHALXA_RS05035Not AvailableNegative1024382 - 10245857874.27
bacterio-opsin activator domain-containing proteinHALXA_RS05040Not AvailablePositive1024693 - 102666970691.6
duf1328 family proteinHALXA_RS05045Not AvailablePositive1026774 - 10269596429.4
aldehyde ferredoxin oxidoreductase family proteinHALXA_RS05050Not AvailablePositive1027195 - 102913270228.3
winged helix-turn-helix domain-containing proteinHALXA_RS05055Not AvailableNegative1029404 - 102980814394.2
helix-turn-helix domain-containing proteinHALXA_RS05060Not AvailablePositive1030061 - 103072924547.6
fmdb family zinc ribbon proteinHALXA_RS05065Not AvailablePositive1030857 - 10310065327.14
pyridoxamine 5'-phosphate oxidase family proteinHALXA_RS05070Not AvailableNegative1031213 - 103166517210.8
hypothetical proteinHALXA_RS05075Not AvailableNegative1031798 - 103221715549.6
hypothetical proteinHALXA_RS05080Not AvailableNegative1032217 - 10324749417.08

Displaying genes 1141 – 1150 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.