Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2267 domain-containing proteinHALXA_RS04995Not AvailablePositive1015281 - 101568814453.2
hypothetical proteinHALXA_RS21965Not AvailableNegative1015764 - 10159285921.54
hypothetical proteinHALXA_RS21970Not AvailableNegative1016101 - 10162746208.91
formyltetrahydrofolate deformylaseHALXA_RS05000Not AvailableNegative1016645 - 101759535118.0
halod1 output domain-containing proteinHALXA_RS05005Not AvailablePositive1017918 - 101823211124.7
shoct domain-containing proteinHALXA_RS05010Not AvailableNegative1018280 - 101870515515.1
phosphoribosylformylglycinamidine synthase subunit pursHALXA_RS05015Not AvailablePositive1018938 - 10191899382.86
phosphoribosylformylglycinamidine synthase iHALXA_RS05020Not AvailablePositive1019190 - 101987924713.6
pas domain s-box proteinHALXA_RS05025Not AvailablePositive1019999 - 1023025107722.0
archaeosine biosynthesis radical sam protein raseaHALXA_RS05030Not AvailableNegative1023052 - 102414940797.1

Displaying genes 1131 – 1140 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.