Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amphi-trp domain-containing proteinHALXA_RS04945Not AvailablePositive1003657 - 100442727242.8
duf547 domain-containing proteinHALXA_RS04950Not AvailableNegative1004451 - 100519128149.0
ai-2e family transporterHALXA_RS04955Not AvailablePositive1005313 - 100633836807.5
duf4350 domain-containing proteinHALXA_RS22350Not AvailableNegative1006379 - 100743735191.2
s49 family peptidaseHALXA_RS04965Not AvailableNegative1007434 - 100844735118.4
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit cofhHALXA_RS04970Not AvailableNegative1008697 - 101006750610.7
methyl-accepting chemotaxis proteinHALXA_RS04975Not AvailableNegative1010150 - 101280194902.4
phosphoribosylaminoimidazolesuccinocarboxamide synthaseHALXA_RS04980Not AvailablePositive1013008 - 101404838805.4
hypothetical proteinHALXA_RS22420Not AvailablePositive1014223 - 101488222137.0
hypothetical proteinHALXA_RS22425Not AvailableNegative1014967 - 10151998753.38

Displaying genes 1121 – 1130 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.