Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6


Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorHALXA_RS04895Not AvailableNegative995594 - 99591112232.5
deoxyribose-phosphate aldolaseHALXA_RS04900Not AvailableNegative996035 - 99668822877.9
ribose 1,5-bisphosphate isomeraseHALXA_RS04905Not AvailablePositive996766 - 99780637329.4
duf63 family proteinHALXA_RS04910Not AvailablePositive997901 - 99872228789.9
carbohydrate kinase family proteinHALXA_RS04915Not AvailablePositive998762 - 99965230822.2
halod1 output domain-containing proteinHALXA_RS04920Not AvailablePositive999787 - 100008611047.6
nucleoside phosphorylaseHALXA_RS04925Not AvailablePositive1000282 - 100101025700.6
hypothetical proteinHALXA_RS04930Not AvailableNegative1001027 - 10012578473.38
hypothetical proteinHALXA_RS04935Not AvailableNegative1001347 - 100252842371.4
hnh endonucleaseHALXA_RS04940Not AvailableNegative1002631 - 100352131233.7

Displaying genes 1111 – 1120 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.