Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydratase family proteinHALXA_RS04795Not AvailablePositive975992 - 97696034291.9
atp-binding proteinHALXA_RS04800Not AvailablePositive977047 - 97754118514.6
hypothetical proteinHALXA_RS04805Not AvailableNegative977556 - 97857236550.7
dipeptide epimeraseHALXA_RS04810Not AvailableNegative978672 - 97972138400.4
duf1611 domain-containing proteinHALXA_RS04815Not AvailableNegative979728 - 98075036622.3
vms1/ankzf1 family peptidyl-trna hydrolaseHALXA_RS04820Not AvailableNegative980837 - 98179935905.2
duf5802 family proteinHALXA_RS04825Not AvailableNegative981894 - 98228914760.2
hypothetical proteinHALXA_RS04830Not AvailablePositive982637 - 98385740201.7
arsr family transcriptional regulatorHALXA_RS04835Not AvailablePositive983971 - 98464825421.8
hypothetical proteinHALXA_RS04840Not AvailableNegative984709 - 98546725468.5

Displaying genes 1091 – 1100 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.