Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseHALXA_RS04645Not AvailableNegative948145 - 94894829307.5
abc transporter atp-binding proteinHALXA_RS04650Not AvailableNegative948948 - 94996137357.7
cbs domain-containing proteinHALXA_RS04655Not AvailableNegative950077 - 95125542044.3
hypothetical proteinHALXA_RS04660Not AvailablePositive951462 - 9517048575.25
50s ribosomal protein l16HALXA_RS04665Not AvailablePositive951904 - 95243419880.7
hypothetical proteinHALXA_RS04670Not AvailablePositive952841 - 9530627583.52
atp-grasp domain-containing proteinHALXA_RS04675Not AvailablePositive953144 - 95402232445.1
hsp20/alpha crystallin family proteinHALXA_RS04680Not AvailableNegative954147 - 95454814871.8
type ii glyceraldehyde-3-phosphate dehydrogenaseHALXA_RS04685Not AvailableNegative954680 - 95576538916.2
type i glyceraldehyde-3-phosphate dehydrogenaseHALXA_RS04690Not AvailablePositive956025 - 95709838635.6

Displaying genes 1061 – 1070 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.