Halopiger xanaduensis SH-6

Non-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Halopiger

Description

Halopiger xanaduensis SH-6.This strain will be used for comparative genome analysis. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusHalopiger
SpeciesHalopiger xanaduensis
StrainSH-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSalinewater- Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopiger xanaduensis SH-6 plasmid pHALXA03, complete sequence.

Gene Summary

Adenine Count

12969 bp

Thymine Count

13057 bp

Guanine Count

21256 bp

Cytosine Count

21481 bp

Genome Length

68763 bp

Protein-coding Genes

98 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinHALXA_RS04595Not AvailableNegative938641 - 93908415773.8
cold-shock proteinHALXA_RS04600Not AvailableNegative939207 - 9394017156.05
lrp/asnc family transcriptional regulatorHALXA_RS04605Not AvailablePositive939639 - 94010317166.1
proton-conducting transporter membrane subunitHALXA_RS04610Not AvailablePositive940414 - 94191352307.9
duf2309 domain-containing proteinHALXA_RS04615Not AvailablePositive941906 - 94448294176.4
hypothetical proteinHALXA_RS04620Not AvailableNegative944558 - 9447767792.8
carbonic anhydraseHALXA_RS04625Not AvailableNegative944872 - 94566028110.0
nadp-dependent oxidoreductaseHALXA_RS04630Not AvailablePositive945821 - 94683736381.3
alpha/beta fold hydrolaseHALXA_RS04635Not AvailablePositive946976 - 94783330775.1
hypothetical proteinHALXA_RS04640Not AvailablePositive947937 - 9481286546.39

Displaying genes 1051 – 1060 of 3973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.