Halalkalicoccus jeotgali B3

CocciNon-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halalkalicoccaceae

Genus

Halalkalicoccus

Description

Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) is non-motile cocci, extreme halophilic, Gram-variable archaeon isolated from shrimp jeotgal, a traditional Korean fermented seafood. (adapted from PMID: 20601480). (HAMAP: HALJB)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalalkalicoccaceae
GenusHalalkalicoccus
SpeciesHalalkalicoccus jeotgali
StrainB3

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Halalkalicoccus jeotgali B3

NC_014300.1NC_014299.1NC_014297.1NC_014301.1NC_014298.1NC_014303.1NC_014302.1

Gene Summary

Adenine Count

8742 bp

Thymine Count

9578 bp

Guanine Count

13180 bp

Cytosine Count

13076 bp

Genome Length

44576 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHACJB3_RS19900Not AvailableNegative164144 - 1643056247.3
excinuclease abc subunit uvrbHACJB3_RS00815Not AvailablePositive164470 - 16653078072.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseHACJB3_RS00820Not AvailableNegative166544 - 16758734977.4
ribonucleoside-diphosphate reductase subunit alphaHACJB3_RS00825Not AvailablePositive167864 - 17025790709.1
ribonucleotide-diphosphate reductase subunit betaHACJB3_RS00830Not AvailablePositive170257 - 17124938261.5
marr family transcriptional regulatorHACJB3_RS00835Not AvailablePositive171382 - 17218828106.5
excinuclease abc subunit cHACJB3_RS00840Not AvailableNegative172189 - 17392263502.4
hypothetical proteinHACJB3_RS00845Not AvailableNegative173975 - 17449318167.8
hypothetical proteinHACJB3_RS00850Not AvailablePositive174597 - 1748519237.54
abc transporter atp-binding proteinHACJB3_RS00855Not AvailablePositive174895 - 17580332303.1

Displaying genes 581 – 590 of 3922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

43 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 43 metabolites

Health Effects

No health effects information available for this bacterium.