Halalkalicoccus jeotgali B3

CocciNon-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halalkalicoccaceae

Genus

Halalkalicoccus

Description

Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) is non-motile cocci, extreme halophilic, Gram-variable archaeon isolated from shrimp jeotgal, a traditional Korean fermented seafood. (adapted from PMID: 20601480). (HAMAP: HALJB)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Halalkalicoccaceae
Genus	Halalkalicoccus
Species	Halalkalicoccus jeotgali
Strain	B3

Profile

Physiology
Gram staining properties	Not Available
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	HostAssociated
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	No

Genome Summary

Halalkalicoccus jeotgali B3 plasmid 3, complete sequence.

NC_014300.1 NC_014299.1 NC_014297.1 NC_014301.1 NC_014298.1 NC_014303.1 NC_014302.1

Gene Summary

Adenine Count

8742 bp

Thymine Count

9578 bp

Guanine Count

13180 bp

Cytosine Count

13076 bp

Genome Length

44576 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
ornithine cyclodeaminase family protein	HACJB3_RS07930	Not Available	Negative	1521046 - 1522044	34723.1
hypothetical protein	HACJB3_RS07935	Not Available	Negative	1522085 - 1522318	7686.4
duf3054 domain-containing protein	HACJB3_RS07940	Not Available	Negative	1522550 - 1522963	14406.0
gnat family n-acetyltransferase	HACJB3_RS07945	Not Available	Positive	1523041 - 1523571	19962.1
nudix hydrolase	HACJB3_RS07950	Not Available	Positive	1523606 - 1524067	17144.6
asparagine synthase c-terminal domain-containing protein	HACJB3_RS07955	Not Available	Negative	1524056 - 1525111	37832.7
php domain-containing protein	HACJB3_RS07960	Not Available	Negative	1525108 - 1525797	24338.8
bola family protein	HACJB3_RS07965	Not Available	Negative	1525860 - 1526108	9030.37
flap endonuclease-1	HACJB3_RS07970	Not Available	Negative	1526149 - 1527126	35405.2
cog1361 s-layer family protein	HACJB3_RS07975	Not Available	Positive	1527222 - 1528496	44447.3

Displaying genes 2061 – 2070 of 3922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000491	D-erythruloseC4H8O4	Not available	Average120.104Da Monoisotopic120.0422587Da
BASm0000718	3-maleylpyruvateC7H4O6	Not available	Average184.104Da Monoisotopic184.001885009Da
BASm0000719	chloramphenicol 3-acetateC13H14Cl2N2O6	Not available	Average365.16Da Monoisotopic364.0228916Da
BASm0000950	L-xyluloseC5H10O5	`527-50-4`	Average150.1299Da Monoisotopic150.05282343Da
BASm0001035	indole-3-pyruvateC11H8NO3	`35656-49-6`	Average202.1861Da Monoisotopic202.0504181Da
BASm0001179	5-hydroxyisourateC5H4N4O4	Not available	Average184.1097Da Monoisotopic184.0232546Da
BASm0001244	2-succinylbenzoateC11H8O5	`27415-09-04`	Average220.181Da Monoisotopic220.038270517Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da

Displaying 1–10 of 43 metabolites

Health Effects

No health effects information available for this bacterium.