Halalkalicoccus jeotgali B3

CocciNon-motile

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halalkalicoccaceae

Genus

Halalkalicoccus

Description

Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) is non-motile cocci, extreme halophilic, Gram-variable archaeon isolated from shrimp jeotgal, a traditional Korean fermented seafood. (adapted from PMID: 20601480). (HAMAP: HALJB)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Halalkalicoccaceae
Genus	Halalkalicoccus
Species	Halalkalicoccus jeotgali
Strain	B3

Profile

Physiology
Gram staining properties	Not Available
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	HostAssociated
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	No

Genome Summary

Halalkalicoccus jeotgali B3 plasmid 3, complete sequence.

NC_014300.1 NC_014299.1 NC_014297.1 NC_014301.1 NC_014298.1 NC_014303.1 NC_014302.1

Gene Summary

Adenine Count

8742 bp

Thymine Count

9578 bp

Guanine Count

13180 bp

Cytosine Count

13076 bp

Genome Length

44576 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
helix-turn-helix domain-containing protein	HACJB3_RS05800	Not Available	Positive	1131946 - 1132596	24115.1
deoxyhypusine synthase	HACJB3_RS05805	Not Available	Negative	1132765 - 1133847	39004.3
nif3-like dinuclear metal center hexameric protein	HACJB3_RS05810	Not Available	Negative	1134199 - 1134960	26453.7
agmatinase	HACJB3_RS05815	Not Available	Negative	1135196 - 1136020	29925.3
translation initiation factor if-5a	HACJB3_RS05820	Not Available	Negative	1136020 - 1136397	13879.5
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme	HACJB3_RS05825	Not Available	Negative	1136442 - 1137512	39537.9
gnat family n-acetyltransferase	HACJB3_RS05830	Not Available	Negative	1137537 - 1137935	14438.1
aarf/abc1/ubib kinase family protein	HACJB3_RS05835	Not Available	Negative	1137967 - 1139631	63720.5
hsp20/alpha crystallin family protein	HACJB3_RS05840	Not Available	Negative	1139638 - 1139994	13254.6
gide domain-containing protein	HACJB3_RS05845	Not Available	Negative	1140033 - 1140809	27155.2

Displaying genes 1621 – 1630 of 3922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000491	D-erythruloseC4H8O4	Not available	Average120.104Da Monoisotopic120.0422587Da
BASm0000718	3-maleylpyruvateC7H4O6	Not available	Average184.104Da Monoisotopic184.001885009Da
BASm0000719	chloramphenicol 3-acetateC13H14Cl2N2O6	Not available	Average365.16Da Monoisotopic364.0228916Da
BASm0000950	L-xyluloseC5H10O5	`527-50-4`	Average150.1299Da Monoisotopic150.05282343Da
BASm0001035	indole-3-pyruvateC11H8NO3	`35656-49-6`	Average202.1861Da Monoisotopic202.0504181Da
BASm0001179	5-hydroxyisourateC5H4N4O4	Not available	Average184.1097Da Monoisotopic184.0232546Da
BASm0001244	2-succinylbenzoateC11H8O5	`27415-09-04`	Average220.181Da Monoisotopic220.038270517Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da

Displaying 1–10 of 43 metabolites

Health Effects

No health effects information available for this bacterium.