Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Thermodesulfobacteria
Order
Thermodesulfobacteriales
Family
Thermodesulfobacteriaceae
Genus
Thermodesulfobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Thermodesulfobacteria |
| Order | Thermodesulfobacteriales |
| Family | Thermodesulfobacteriaceae |
| Genus | Thermodesulfobacterium |
| Species | Thermodesulfobacterium geofontis |
| Strain | OPF15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | 83 |
| Temperature range | Thermophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
569130 bp
Thymine Count
565332 bp
Guanine Count
253558 bp
Cytosine Count
246357 bp
Genome Length
1634377 bp
Protein-coding Genes
1649 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-a crispr-associated ramp protein csm4 | TOPB45_RS05745 | Not Available | Positive | 1108618 - 1109583 | 37962.9 |
| type iii-a crispr-associated ramp protein csm5 | TOPB45_RS05750 | Not Available | Positive | 1109595 - 1110785 | 46474.4 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | TOPB45_RS05755 | Not Available | Positive | 1110787 - 1111638 | 32767.8 |
| crispr-associated carf protein csx1 | TOPB45_RS05760 | Not Available | Positive | 1111607 - 1112977 | 53882.7 |
| hypothetical protein | TOPB45_RS05765 | Not Available | Positive | 1112983 - 1113660 | 26476.7 |
| crispr-associated endonuclease cas2 | TOPB45_RS05770 | Not Available | Positive | 1113645 - 1113905 | 10435.8 |
| crispr-associated endonuclease cas1 | TOPB45_RS05775 | Not Available | Positive | 1113922 - 1114797 | 34202.1 |
| crispr-associated endonuclease cas2 | TOPB45_RS05780 | Not Available | Positive | 1114812 - 1115057 | 9818.04 |
| gamma-glutamylcyclotransferase | TOPB45_RS09260 | Not Available | Negative | 1118541 - 1118750 | 8324.31 |
| cold-shock protein | TOPB45_RS05785 | Not Available | Negative | 1118692 - 1118991 | 11637.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

