Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase cobq | HMPREF9445_00666 | Not Available | Positive | 743383 - 744942 | 57697.2 |
| putative threonine-phosphate decarboxylase | HMPREF9445_00667 | Not Available | Positive | 744953 - 745990 | 38694.3 |
| cobalamin biosynthesis protein cobd | HMPREF9445_00668 | Not Available | Positive | 745994 - 746986 | 36757.2 |
| alpha-ribazole phosphatase | HMPREF9445_00669 | Not Available | Negative | 747009 - 747539 | 20037.9 |
| cobalamin-5-phosphate synthase | HMPREF9445_00670 | Not Available | Negative | 747630 - 748370 | 27727.9 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | HMPREF9445_00671 | Not Available | Negative | 748429 - 749466 | 37735.9 |
| putative adenosylcobalamin biosynthesis protein cobu | HMPREF9445_00672 | Not Available | Negative | 749489 - 750001 | 19421.2 |
| Trna-gly | Not Available | Not Available | Positive | 750151 - 750223 | Not Available |
| proline--trna ligase | HMPREF9445_00674 | Not Available | Positive | 750544 - 752037 | 56756.0 |
| hypothetical protein | HMPREF9445_00675 | Not Available | Negative | 752136 - 752954 | 30924.5 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


