Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9445_03209 | Not Available | Positive | 3611826 - 3612035 | 8195.57 |
| hypothetical protein | HMPREF9445_03210 | Not Available | Negative | 3612022 - 3612195 | 6355.32 |
| malate dehydrogenase | HMPREF9445_03211 | Not Available | Negative | 3612192 - 3614480 | 84376.2 |
| glycosyl hydrolase family 20, catalytic domain protein | HMPREF9445_03212 | Not Available | Positive | 3614656 - 3617157 | 92392.1 |
| o-acetylhomoserine aminocarboxypropyltransferase | HMPREF9445_03213 | Not Available | Negative | 3617248 - 3618528 | 46623.5 |
| n-acetylmuramoyl-l-alanine amidase | HMPREF9445_03214 | Not Available | Positive | 3618668 - 3619711 | 39168.5 |
| putative membrane protein | HMPREF9445_03215 | Not Available | Negative | 3619714 - 3620442 | 25634.8 |
| conserved domain protein | HMPREF9445_03216 | Not Available | Positive | 3620444 - 3620695 | 9557.57 |
| hypothetical protein | HMPREF9445_03217 | Not Available | Positive | 3620738 - 3621613 | 32999.3 |
| dj-1/pfpi family protein | HMPREF9445_03218 | Not Available | Negative | 3621649 - 3622242 | 21919.3 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


