Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase, nad-specific | HMPREF9445_03189 | Not Available | Positive | 3593235 - 3594572 | 48482.2 |
| creatinase | HMPREF9445_03190 | Not Available | Positive | 3594723 - 3595886 | 42731.4 |
| hypothetical protein | HMPREF9445_03191 | Not Available | Negative | 3596128 - 3597126 | 38566.0 |
| holliday junction dna helicase ruva | HMPREF9445_03192 | Not Available | Negative | 3597166 - 3597768 | 21265.1 |
| diaminopimelate dehydrogenase | HMPREF9445_03193 | Not Available | Positive | 3597935 - 3598834 | 32460.4 |
| putative rip metalloprotease rsep | HMPREF9445_03194 | Not Available | Negative | 3598943 - 3600283 | 50514.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HMPREF9445_03195 | Not Available | Negative | 3600314 - 3601471 | 42446.7 |
| peptidase, m23 family | HMPREF9445_03196 | Not Available | Negative | 3601537 - 3602406 | 32820.5 |
| 16s rrna processing protein rimm | HMPREF9445_03197 | Not Available | Negative | 3602456 - 3602992 | 20474.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | HMPREF9445_03198 | Not Available | Negative | 3603016 - 3604320 | 47574.0 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


