Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF9445_02959 | Not Available | Negative | 3285396 - 3287306 | 70652.2 |
| gscfa family protein | HMPREF9445_02960 | Not Available | Positive | 3287569 - 3288462 | 34465.4 |
| alanine racemase | HMPREF9445_02961 | Not Available | Positive | 3288438 - 3290924 | 92826.0 |
| twin arginine-targeting protein translocase, tata/e family | HMPREF9445_02962 | Not Available | Positive | 3291052 - 3291270 | 7870.87 |
| twin arginine-targeting protein translocase tatc | HMPREF9445_02963 | Not Available | Positive | 3291333 - 3292157 | 31737.3 |
| conserved domain protein | HMPREF9445_02964 | Not Available | Positive | 3292154 - 3295576 | 130219.0 |
| transporter, major facilitator family protein | HMPREF9445_02965 | Not Available | Negative | 3295874 - 3297316 | 53036.4 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | HMPREF9445_02966 | Not Available | Negative | 3297459 - 3298415 | 35694.8 |
| putative galactitol permease iic component | HMPREF9445_02967 | Not Available | Negative | 3298463 - 3299836 | 49444.2 |
| hypothetical protein | HMPREF9445_02968 | Not Available | Positive | 3299960 - 3300100 | 5405.83 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


