Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase, rlua family | HMPREF9445_02769 | Not Available | Positive | 3054433 - 3055104 | 25429.8 |
| peptidase, s9a/b/c family, catalytic domain protein | HMPREF9445_02770 | Not Available | Positive | 3055127 - 3057664 | 94945.6 |
| hypothetical protein | HMPREF9445_02771 | Not Available | Positive | 3057665 - 3057877 | 7599.46 |
| putative fused dna-binding response regulator | HMPREF9445_02772 | Not Available | Negative | 3058103 - 3059461 | 50388.5 |
| peptidyl-prolyl cis-trans isomerase, cyclophilin-type | HMPREF9445_02773 | Not Available | Positive | 3059554 - 3060393 | 31199.4 |
| peptidase m16 inactive domain protein | HMPREF9445_02774 | Not Available | Positive | 3060397 - 3061638 | 47487.9 |
| mate efflux family protein | HMPREF9445_02775 | Not Available | Positive | 3061695 - 3063059 | 50183.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9445_02776 | Not Available | Positive | 3063114 - 3065459 | 87387.6 |
| hypothetical protein | HMPREF9445_02777 | Not Available | Positive | 3065569 - 3070110 | 167355.0 |
| outer membrane protein, omp85 family | HMPREF9445_02778 | Not Available | Positive | 3070112 - 3072466 | 89518.0 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


