Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain protein | HMPREF9445_02699 | Not Available | Negative | 2985690 - 2989280 | 134498.0 |
| sigma factor regulatory protein, fecr/pupr family | HMPREF9445_02700 | Not Available | Negative | 2989439 - 2990584 | 43880.5 |
| rna polymerase sigma-70 factor | HMPREF9445_02701 | Not Available | Negative | 2990664 - 2991152 | 19681.3 |
| hypothetical protein | HMPREF9445_02702 | Not Available | Negative | 2991309 - 2991518 | 7899.45 |
| exonuclease vii, large subunit | HMPREF9445_02703 | Not Available | Negative | 2991523 - 2992773 | 46399.7 |
| peptidase, s8/s53 family | HMPREF9445_02704 | Not Available | Negative | 2992815 - 2994185 | 50070.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | HMPREF9445_02705 | Not Available | Negative | 2994224 - 2995390 | 44222.5 |
| phosphate-selective porin o and p | HMPREF9445_02706 | Not Available | Positive | 2995498 - 2996553 | 40178.0 |
| hypothetical protein | HMPREF9445_02707 | Not Available | Positive | 2996591 - 2997442 | 33104.8 |
| polygalacturonase | HMPREF9445_02708 | Not Available | Positive | 2997546 - 2998904 | 50222.9 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


