Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1 family protein | HMPREF9445_02659 | Not Available | Negative | 2926849 - 2927394 | 19392.8 |
| tonb family domain protein | HMPREF9445_02660 | Not Available | Negative | 2927409 - 2928221 | 28545.8 |
| transport energizing protein, exbd/tolr family | HMPREF9445_02661 | Not Available | Negative | 2928262 - 2928636 | 13883.0 |
| transporter, mota/tolq/exbb proton channel family protein | HMPREF9445_02662 | Not Available | Negative | 2928708 - 2929424 | 25461.9 |
| pyridoxine 5'-phosphate synthase | HMPREF9445_02663 | Not Available | Negative | 2929424 - 2930137 | 26333.4 |
| nad(+)/nadh kinase | HMPREF9445_02664 | Not Available | Positive | 2930241 - 2931110 | 32271.7 |
| wd40-like protein | HMPREF9445_02665 | Not Available | Negative | 2931195 - 2934467 | 122731.0 |
| malate dehydrogenase, nad-dependent | HMPREF9445_02666 | Not Available | Negative | 2934613 - 2935554 | 32739.9 |
| hypothetical protein | HMPREF9445_02667 | Not Available | Positive | 2935783 - 2936661 | 33507.2 |
| outer membrane efflux protein | HMPREF9445_02668 | Not Available | Positive | 2936787 - 2938295 | 55543.1 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


