Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain protein | HMPREF9445_02331 | Not Available | Negative | 2570351 - 2573359 | 110839.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | HMPREF9445_02332 | Not Available | Negative | 2573759 - 2576227 | 92142.0 |
| hypothetical protein | HMPREF9445_02333 | Not Available | Positive | 2576342 - 2576491 | 5729.15 |
| transcriptional regulator, laci family | HMPREF9445_02334 | Not Available | Positive | 2576558 - 2577589 | 37965.4 |
| transporter, major facilitator family protein | HMPREF9445_02335 | Not Available | Positive | 2577589 - 2578995 | 51562.3 |
| glycosyl hydrolase family 65 central catalytic domain protein | HMPREF9445_02336 | Not Available | Positive | 2579113 - 2581431 | 89691.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9445_02337 | Not Available | Positive | 2581441 - 2582493 | 39295.3 |
| rnd transporter, hae1/hme family, permease protein | HMPREF9445_02338 | Not Available | Positive | 2582545 - 2585577 | 110924.0 |
| outer membrane efflux protein | HMPREF9445_02339 | Not Available | Positive | 2585617 - 2586891 | 46979.1 |
| sodium ion-translocating decarboxylase, beta subunit | HMPREF9445_02340 | Not Available | Negative | 2586984 - 2588219 | 44077.7 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


