Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine abc transporter, atp-binding protein pota | HMPREF9445_00216 | Not Available | Negative | 233695 - 235092 | 52238.5 |
| serine 3-dehydrogenase | HMPREF9445_00217 | Not Available | Positive | 235286 - 236047 | 27329.1 |
| hypothetical protein | HMPREF9445_00218 | Not Available | Positive | 236145 - 236321 | 6427.03 |
| hypothetical protein | HMPREF9445_00219 | Not Available | Negative | 236326 - 236463 | 5390.76 |
| carboxymuconolactone decarboxylase family protein | HMPREF9445_00220 | Not Available | Positive | 236515 - 237342 | 30505.1 |
| flavodoxin | HMPREF9445_00221 | Not Available | Positive | 237383 - 238027 | 23494.1 |
| cyclic nucleotide-binding domain protein | HMPREF9445_00222 | Not Available | Positive | 238545 - 239108 | 21869.3 |
| multidrug resistance protein, smr family | HMPREF9445_00223 | Not Available | Positive | 239200 - 239526 | 11548.9 |
| rtec protein | HMPREF9445_00224 | Not Available | Positive | 239619 - 240467 | 33424.9 |
| site-specific recombinase, phage integrase family | HMPREF9445_00225 | Not Available | Negative | 240840 - 242066 | 47224.5 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


