Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides clarus |
| Strain | YIT 12056 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
995587 bp
Thymine Count
1050938 bp
Guanine Count
876015 bp
Cytosine Count
824150 bp
Genome Length
3746690 bp
Protein-coding Genes
3272 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | HMPREF9445_02071 | Not Available | Negative | 2291856 - 2293346 | 56820.9 |
| peptidase, m24 family | HMPREF9445_02072 | Not Available | Positive | 2293727 - 2295100 | 51714.9 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HMPREF9445_02073 | Not Available | Negative | 2295175 - 2296680 | 56603.1 |
| phosphoribulokinase/uridine kinase family protein | HMPREF9445_02074 | Not Available | Negative | 2296773 - 2298446 | 64424.1 |
| na/pi-cotransporter ii-like protein | HMPREF9445_02075 | Not Available | Positive | 2298530 - 2300227 | 63162.0 |
| rubredoxin | HMPREF9445_02076 | Not Available | Negative | 2300224 - 2300385 | 5948.84 |
| calcium-translocating p-type atpase, pmca-type | HMPREF9445_02077 | Not Available | Positive | 2300638 - 2303322 | 98336.8 |
| had hydrolase, family ia, variant 3 | HMPREF9445_02078 | Not Available | Positive | 2303327 - 2303944 | 24046.5 |
| riboflavin biosynthesis protein ribf | HMPREF9445_02079 | Not Available | Positive | 2303965 - 2304885 | 33960.0 |
| caax amino terminal protease family protein | HMPREF9445_02080 | Not Available | Positive | 2305237 - 2306019 | 28524.8 |
Pathways
126 pathways
Health Effects
No health effects information available for this bacterium.


