Rothia dentocariosa ATCC 17931

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Rothia

Description

Rothia dentocariosa ATCC 17931 is a gram-positive, coccoid-shaped bacterium that thrives at mesophilic temperatures, demonstrating a preference for growth in moderate environments. This microbe is classified as a chemoheterotroph, utilizing organic compounds for both carbon and energy. Rothia dentocariosa is primarily found in the oral cavity, specifically in dental plaque, but it can also inhabit other body sites including the respiratory tract and, in some cases, it may be isolated from the gastrointestinal tract. As a gram-positive organism, Rothia dentocariosa exhibits a thick peptidoglycan layer, which contributes to its rigidity and staining characteristics during the Gram staining process. Its coccoid shape gives it a spherical appearance, which can often manifest in clusters or pairs. The mesophilic temperature preference suggests that this bacterium grows optimally at temperatures around 30-37°C, which is consistent with the human body temperature and indicates its adaptation to the human oral environment. Being a chemoheterotroph, Rothia dentocariosa relies on organic nutrients from its environment, primarily derived from dietary sources and metabolic products of other microorganisms in the mouth. This bacterium acts as a facultative anaerobe, allowing it to survive in both aerobic and anaerobic conditions, thereby thriving in the dynamic microbiome of the oral cavity. Rothia dentocariosa plays a significant role in oral health, as it can interact with other oral bacteria, influencing plaque formation and dental health. It is also of clinical interest because, under certain conditions, it has been associated with opportunistic infections, especially in immunocompromised individuals. Its ability to survive in various environments and its complex interactions with other oral microbes highlight its importance in both health and disease.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusRothia
SpeciesRothia dentocariosa
StrainATCC 17931

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rothia dentocariosa ATCC 17931
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Rothia dentocariosa ATCC 17931

Accession NumberNC_014643.1

Gene Summary

Adenine Count

576198 bp

Thymine Count

584400 bp

Guanine Count

675663 bp

Cytosine Count

669764 bp

Genome Length

2506025 bp

Protein-coding Genes

2092 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4192 family proteinHMPREF0733_RS00010Not Available-1584 - 322162113.2
pac2 family proteinHMPREF0733_RS00015Not Available-3490 - 440134301.9
leucyl aminopeptidaseHMPREF0733_RS00020C5CCM4+4627 - 612051979.8
dihydrolipoyl dehydrogenaseHMPREF0733_RS00025P54533+6447 - 782948613.5
2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferaseHMPREF0733_RS00030Q8NNJ2+7997 - 967056676.9
hypothetical proteinHMPREF0733_RS00035Not Available+9817 - 1016412145.6
hypothetical proteinHMPREF0733_RS00040Not Available-10309 - 1145741798.6
lipoyl(octanoyl) transferase lipbHMPREF0733_RS00045B2GJ87+11955 - 1265925962.4
lipoyl synthaseHMPREF0733_RS00050B2GJ88+12868 - 1387537320.9
duf4191 domain-containing proteinHMPREF0733_RS00055Not Available+14132 - 1485126491.8

Displaying genes 1 – 10 of 2152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

346 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001369peroxynitriteNO3Chemical structure of peroxynitrite19059-14-4
Average62.0049Da
Monoisotopic61.987817871Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 11–20 of 346 metabolites