Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail subunit | PEDSA_RS12110 | Not Available | Negative | 2803220 - 2807308 | 142616.0 |
| porp/sprf family type ix secretion system membrane protein | PEDSA_RS12115 | Not Available | Negative | 2807638 - 2808504 | 32507.2 |
| Virion structural protein | PEDSA_RS12120 | Not Available | Negative | 2808655 - 2816337 | 263033.0 |
| hypothetical protein | PEDSA_RS19620 | Not Available | Positive | 2816409 - 2817425 | 37994.4 |
| Minor tail protein | PEDSA_RS12130 | Not Available | Negative | 2817448 - 2818041 | 20893.7 |
| Minor tail protein | PEDSA_RS12135 | Not Available | Negative | 2818061 - 2818669 | 20862.8 |
| Minor tail protein | PEDSA_RS12140 | Not Available | Negative | 2818686 - 2819297 | 21116.8 |
| Prga-formyltransferase | PEDSA_RS12145 | Not Available | Negative | 2819312 - 2820265 | 35673.7 |
| chromosomal replication initiator protein dnaa | PEDSA_RS00010 | Not Available | Positive | 106 - 1533 | 53637.0 |
| wd40/yvtn/bnr-like repeat-containing protein | PEDSA_RS00015 | Not Available | Positive | 1663 - 2757 | 40235.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.