Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase family protein | PEDSA_RS04245 | Not Available | Positive | 1056148 - 1057320 | 44661.9 |
| glycoside hydrolase family 88 protein | PEDSA_RS04250 | Not Available | Positive | 1057339 - 1058544 | 45817.4 |
| bama/tama family outer membrane protein | PEDSA_RS04255 | Not Available | Negative | 1058582 - 1062127 | 135330.0 |
| duf2147 domain-containing protein | PEDSA_RS04260 | Not Available | Positive | 1062290 - 1062721 | 16474.0 |
| atp-binding protein | PEDSA_RS04265 | Not Available | Positive | 1062989 - 1065136 | 82661.7 |
| cytochrome c maturation protein ccme | PEDSA_RS04270 | Not Available | Positive | 1065240 - 1065641 | 14877.9 |
| heme lyase ccmf/nrfe family subunit | PEDSA_RS04275 | Not Available | Positive | 1065649 - 1068084 | 91562.6 |
| rossmann-like and duf2520 domain-containing protein | PEDSA_RS04280 | Not Available | Positive | 1068094 - 1068873 | 28923.8 |
| 2fe-2s iron-sulfur cluster-binding protein | PEDSA_RS04285 | Not Available | Positive | 1068903 - 1069235 | 12216.4 |
| fe-s cluster assembly protein iscx | PEDSA_RS04290 | Not Available | Positive | 1069249 - 1069491 | 9654.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.