Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | PEDSA_RS03395 | Not Available | Negative | 816310 - 817602 | 47903.1 |
| hyc_cc_pp family protein | PEDSA_RS03400 | Not Available | Negative | 817715 - 818167 | 16866.4 |
| carboxypeptidase-like regulatory domain-containing protein | PEDSA_RS03405 | Not Available | Negative | 818495 - 821200 | 100235.0 |
| duf6266 family protein | PEDSA_RS03410 | Not Available | Negative | 821698 - 822342 | 23639.8 |
| susc/raga family tonb-linked outer membrane protein | PEDSA_RS03415 | Not Available | Positive | 822997 - 826140 | 116525.0 |
| ragb/susd family nutrient uptake outer membrane protein | PEDSA_RS03420 | Not Available | Positive | 826151 - 827995 | 69167.7 |
| duf5017 domain-containing protein | PEDSA_RS03425 | Not Available | Positive | 828057 - 829013 | 36543.7 |
| hypothetical protein | PEDSA_RS03430 | Not Available | Positive | 829032 - 831749 | 103146.0 |
| age family epimerase/isomerase | PEDSA_RS03435 | Not Available | Negative | 831931 - 833142 | 47750.8 |
| sodium:solute symporter family protein | PEDSA_RS03440 | Not Available | Negative | 833154 - 834623 | 53703.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.