Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan lyase | PEDSA_RS18705 | Not Available | Positive | 4470808 - 4472706 | 69996.6 |
| family 43 glycosylhydrolase | PEDSA_RS18710 | Not Available | Positive | 4472694 - 4473716 | 39626.2 |
| rhamnogalacturonan acetylesterase | PEDSA_RS20360 | Not Available | Positive | 4473713 - 4474477 | 28415.3 |
| gdsl-type esterase/lipase family protein | PEDSA_RS20365 | Not Available | Positive | 4474484 - 4475278 | 29860.6 |
| arylsulfatase | PEDSA_RS18725 | Not Available | Positive | 4475562 - 4477169 | 61110.7 |
| is3 family transposase | PEDSA_RS18730 | Not Available | Negative | 4477603 - 4478454 | 32925.9 |
| transposase | PEDSA_RS18735 | Not Available | Negative | 4478460 - 4478816 | 13343.0 |
| sugar-binding domain-containing protein | PEDSA_RS18740 | Not Available | Positive | 4479013 - 4481910 | 110536.0 |
| glycoside hydrolase family 88 protein | PEDSA_RS18745 | Not Available | Positive | 4481922 - 4483067 | 43963.4 |
| glycosyl hydrolase 115 family protein | PEDSA_RS18750 | Not Available | Positive | 4483179 - 4485671 | 94928.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.