Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | PEDSA_RS16955 | Not Available | Positive | 4014967 - 4017939 | 108841.0 |
| ragb/susd family nutrient uptake outer membrane protein | PEDSA_RS16960 | Not Available | Positive | 4017956 - 4019596 | 61924.1 |
| hypothetical protein | PEDSA_RS16965 | Not Available | Positive | 4019748 - 4020578 | 29980.4 |
| hypothetical protein | PEDSA_RS16970 | Not Available | Positive | 4020751 - 4021143 | 13498.1 |
| duf6686 family protein | PEDSA_RS16975 | Not Available | Negative | 4021289 - 4021600 | 12342.5 |
| duf4374 domain-containing protein | PEDSA_RS16980 | Not Available | Negative | 4021661 - 4022905 | 45303.2 |
| tonb-dependent receptor | PEDSA_RS16985 | Not Available | Negative | 4022919 - 4025276 | 87991.3 |
| duf4198 domain-containing protein | PEDSA_RS16990 | Not Available | Negative | 4025450 - 4026166 | 26605.6 |
| pepsy-associated tm helix domain-containing protein | PEDSA_RS16995 | Not Available | Negative | 4026163 - 4027425 | 48086.3 |
| oligosaccharide flippase family protein | PEDSA_RS17000 | Not Available | Negative | 4027549 - 4029003 | 55079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.